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1.
Cryobiology ; 114: 104851, 2024 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-38237749

RESUMO

Sperm quality is preserved through the crucial involvement of antioxidants, which play a vital role in minimizing the occurrence of reactive oxygen species (ROS) during the cryopreservation process. The suitability of the type and concentration of antioxidants are species-dependent, and this study is crucial in order to improve the quality of the climbing perch sperm post-cryopreservation. Therefore, this study aimed to determine the best type and concentration of antioxidants for cryopreservation of climbing perch Anabas testudineus sperm. To achieve this, 6 types of antioxidants, namely, ascorbic acid, beta-carotene, glutathione, butylated hydroxytoluene (BHT), myo-inositol, and alpha-tocopherol, with inclusion of a control were tested in 3 replications at three concentration levels of 0 mg/L (control), 20 mg/L, 40 mg/L, and 60 mg/L. Sperm was diluted in a glucose-base extender at a ratio of 1:60 (sperm: glucose base), then 10 % DMSO and 5 % egg yolk was added before cryopreservation for two weeks. The results showed that the type and concentration of antioxidants had a significant effect on the motility and viability of cryopreserved climbing perch sperm (P < 0.05), where the best results for ascorbic acid, beta-carotene, glutathione, myo-inositol, and alpha-tocopherol were obtained at a concentration of 60 mg/L, while BHT was at a concentration of 20 mg/L. The best results for glutathione, myo-inositol, and alpha-tocopherol were significantly different from other treatments, while the best results for ascorbic acid and beta-carotene (60 mg/L) were not significantly different from the 40 mg/L concentration, while the best results for BHT were not significantly different from the control treatments. Therefore, the best concentration of glutathione, myo-inositol, and alpha-tocopherol was 60 mg/L, while for ascorbic acid and beta-carotene it was 40 mg/L, and BHT was not recommended. DNA integrity analysis indicated the absence of fragmentation in all samples, including fresh, control, and treated sperm. Based on practical and economic considerations, myo-inositol at 60 mg/L was recommended for cryopreservation of climbing perch A. testudineus sperm.


Assuntos
Percas , Preservação do Sêmen , Animais , Masculino , Antioxidantes/farmacologia , Motilidade dos Espermatozoides , alfa-Tocoferol/farmacologia , beta Caroteno/farmacologia , Criopreservação/métodos , Sêmen , Preservação do Sêmen/veterinária , Preservação do Sêmen/métodos , Espermatozoides , Ácido Ascórbico/farmacologia , Glutationa/farmacologia , DNA , Glucose/farmacologia , Inositol/farmacologia
2.
Glob Chang Biol ; 30(1): e17084, 2024 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-38273567

RESUMO

Excessive fine sediment (particles <2 mm) deposition in freshwater systems is a pervasive stressor worldwide. However, understanding of ecological response to excess fine sediment in river systems at the global scale is limited. Here, we aim to address whether there is a consistent response to increasing levels of deposited fine sediment by freshwater invertebrates across multiple geographic regions (Australia, Brazil, New Zealand and the UK). Results indicate ecological responses are not globally consistent and are instead dependent on both the region and the facet of invertebrate diversity considered, that is, taxonomic or functional trait structure. Invertebrate communities of Australia were most sensitive to deposited fine sediment, with the greatest rate of change in communities occurring when fine sediment cover was low (below 25% of the reach). Communities in the UK displayed a greater tolerance with most compositional change occurring between 30% and 60% cover. In both New Zealand and Brazil, which included the most heavily sedimented sampled streams, the communities were more tolerant or demonstrated ambiguous responses, likely due to historic environmental filtering of invertebrate communities. We conclude that ecological responses to fine sediment are not generalisable globally and are dependent on landscape filters with regional context and historic land management playing important roles.


Assuntos
Sedimentos Geológicos , Invertebrados , Animais , Invertebrados/fisiologia , Água Doce , Rios , Nova Zelândia , Ecossistema , Biodiversidade , Monitoramento Ambiental
3.
Theriogenology ; 201: 24-29, 2023 Apr 15.
Artigo em Inglês | MEDLINE | ID: mdl-36822040

RESUMO

The climbing perch, Anabas testudineus is a freshwater fish that has economic value in Indonesia. It is cultured in the country, but the breeding technology, specifically sperm storage, is not well developed. Sperm cryopreservation is one of the preservation methods that need to be developed to support fish breeding technology. The type of cryoprotectants and its concentration are species-dependent and determines the success of this approach. Therefore, this study is aimed at determining the optimal type and concentration of cryoprotectant for sperm cryopreservation of A. testudineus. Four separate study series were performed, each of which evaluated one type of cryoprotectant at five concentration levels. The cryoprotectants used were DMSO, methanol, glycerol, and ethanol, and the tested concentrations were 0%, 5%, 10%, 15%, and 20%, which were combined with 5% egg yolks. Each treatment was conducted with three replications. The results showed that the type of cryoprotectant and its concentration significantly affected sperm motility, viability, and fertility of climbing perch (P < 0.05). The best outcome was obtained in DMSO, and methanol at a concentration of 10%, glycerol at 5%, and ethanol at 15%. However, the highest motility, viability, and fertility values were observed at 10% DMSO, indicating it is the best type and concentration for sperm cryopreservation of climbing perch A. testudineus.


Assuntos
Percas , Preservação do Sêmen , Masculino , Animais , Dimetil Sulfóxido/farmacologia , Glicerol/farmacologia , Metanol/farmacologia , Motilidade dos Espermatozoides , Preservação do Sêmen/veterinária , Preservação do Sêmen/métodos , Sêmen , Crioprotetores/farmacologia , Espermatozoides , Fertilidade , Criopreservação/veterinária , Criopreservação/métodos , Etanol/farmacologia
5.
Rev Bras Parasitol Vet ; 31(1): e020421, 2022.
Artigo em Inglês | MEDLINE | ID: mdl-35293430

RESUMO

Betta rubra is an ornamental freshwater fish endemic to northern Sumatra, Indonesia. The B. rubra population has decreased in recent decades, and is classified as an endangered species in the IUCN Red List. This study aims to report for the first time infection by L. cyprinacea in B. rubra harvested from the Aceh Besar region of Indonesia. The fish samples were obtained from the Cot Bira tributaries, Aceh Besar District, Indonesia from January to December 2020. The results showed that the parasite infected 6 out of 499 samples in August and September, with a prevalence and intensity rate of 1% and 2 parasites/fish, respectively. The eyes and pectoral fins were the common infection sites. Despite B. rubra is not an optimal host (small size) for the parasite, this parasite might serve as additional threatening factors for the endangered B. rubra fish population.


Assuntos
Copépodes , Animais , Acetona/análogos & derivados , Peixes/parasitologia , Água Doce , Indonésia/epidemiologia
6.
Rev. bras. parasitol. vet ; 31(1): e020421, 2022. tab, graf
Artigo em Inglês | LILACS, VETINDEX | ID: biblio-1365762

RESUMO

Abstract Betta rubra is an ornamental freshwater fish endemic to northern Sumatra, Indonesia. The B. rubra population has decreased in recent decades, and is classified as an endangered species in the IUCN Red List. This study aims to report for the first time infection by L. cyprinacea in B. rubra harvested from the Aceh Besar region of Indonesia. The fish samples were obtained from the Cot Bira tributaries, Aceh Besar District, Indonesia from January to December 2020. The results showed that the parasite infected 6 out of 499 samples in August and September, with a prevalence and intensity rate of 1% and 2 parasites/fish, respectively. The eyes and pectoral fins were the common infection sites. Despite B. rubra is not an optimal host (small size) for the parasite, this parasite might serve as additional threatening factors for the endangered B. rubra fish population.


Resumo Betta rubra é um peixe de água doce ornamental endemico da região norte Sumatra, Indonesia. A população de Betta rubra diminuiu ao longo dos anos, sendo classificada como espécie em extinção na Lista Vermelha da IUCN. Este estudo tem como objetivo relatar pela primeira vez infecção por L. cyprinacea em B. rubra coletados na região de Aceh Besar na Indonésia. As amostras de peixes foram obtidas nos afluentes Cot Bira, distrito de Aceh Besar, Indonésia de janeiro a dezembro de 2020. Os resultados mostraram que o parasito infectou 6 das 499 amostras em agosto e setembro, com uma prevalência e taxa de intensidade de 1% e 2 parasitas/peixes, respectivamente. Os olhos e as nadadeiras peitorais foram os sítios de infecção mais comuns. Apesar de B. rubra não ser um hospedeiro ideal (pequeno tamanho) para o parasita, este parasita pode servir como fator de ameaça adicional para a população de peixes B. rubra, ameaçada de extinção.


Assuntos
Animais , Copépodes , Acetona/análogos & derivados , Peixes/parasitologia , Água Doce , Hidrazonas , Indonésia/epidemiologia
7.
J Anim Ecol ; 90(9): 2135-2146, 2021 09.
Artigo em Inglês | MEDLINE | ID: mdl-34363703

RESUMO

Multidimensional analysis of community stability has recently emerged as an overarching approach to evaluating ecosystem response to disturbance. However, the approach has previously been applied only in experimental and modelling studies. We applied this concept to an 18-year time series (2000-2017) of macroinvertebrate community dynamics from a southeast Alaskan river to further develop and test the approach in relation to the effects of two extreme flood events occurring in 2005 (event 1) and 2014 (event 2). Five components of stability were calculated for pairs of pre- or post-event years. Individual components were tested for differences between pre- and post-event time periods. Stability components' pairwise correlations were assessed and ellipsoids of stability were developed for each time period and compared to a null model derived from the permuted dataset. Only one stability component demonstrated a significant difference between time periods. In contrast, 80% of moderate and significant correlations between stability components were degraded post-disturbance and significant changes to the form of stability ellipsoids were observed. Ellipsoids of stability for all periods after the initial disturbance (2005) were not different to the null model. Our results illustrate that the dimensionality of stability approach can be applied to natural ecosystem time-series data. The major increase in dimensionality of stability observed following disturbance potentially indicates significant shifts in the processes which drive stability following disturbance. This evidence improves our understanding of community response beyond what is possible through analysis of individual stability components.


Assuntos
Ecossistema , Rios , Animais , Inundações , Invertebrados
8.
Braz. J. Vet. Res. Anim. Sci. (Online) ; 58: e168702, 2021. ilus, tab
Artigo em Inglês | LILACS, VETINDEX | ID: biblio-1344676

RESUMO

Naleh fish Barbonymus sp. is a commercial freshwater fish, which is indigenous to Aceh, Indonesia. The population of this species has declined over the years as a result of habitat perturbations and overfishing. Hence, the crucial need to develop a cryopreservation method to support breeding programs. This involved the use of a cryoprotectant as an important component. The objective of this study, therefore, was to explore the best cryoprotectant for naleh fish spermatozoa, and a total of five types were tested. These include the DMSO, Methanol, Ethanol, Glycerol, and Ethylene Glycol at a similar concentration of 10%, which were individually combined with 15% egg yolk, and every treatment was performed in three replications. Conversely, Ringer's solution was adopted as an extender, and the sperm was cryopreserved in liquid nitrogen for 15 days. The results showed significant influence on sperm motility and viability, as well as egg fertility of naleh fish (P <0.05), although the DMSO provided the best outcome, compared to others at 47.17%, 50.13%, and 45.67%, respectively. Furthermore, DNA fragmentation had not occurred in the fresh and cryopreserved sperm samples, indicating the protective effect of tested cryoprotectants. It is concluded that the 10% DMSO and 15% egg yolk is the best cryoprotectant for naleh fish spermatozoa.(AU)


O peixe naleh Barbonymus sp. é um peixe comercial de água doce, originário de Aceh, Indonésia. Durante vários anos, as perturbações provocadas no seu habitat e a pesca predatória determinaram o declínio da sua população, cuja preservação deve apoiar-se em um programa de reprodução controlada, com o emprego de espermatozoides criopreservados. O presente trabalho realizou um estudo comparativo de cinco crioprotetores: dimetilsultóxido, metanol, etanol, glicerol e etileno glicol. Todos os crioprotetores foram testados na concentração de 10%, combinados a 15% de gema de ovo. Cada tratamento foi efetuado em triplicatas. A solução de ringer foi utilizada como extensor e o esperma foi criopreservado em nitrogênio líquido por 15 dias. Os resultados obtidos revelaram a existência de influência significante (P<0,05) na viabilidade e motilidade espermática bem como na fertilidade dos ovos do peixe naleh, em que o dimetilsulfóxido apresentou o melhor resultado com os valores de 47,17%, 50,13% e 45,67%, respectivamente. Por outro lado, a fragmentação do DNA não ocorreu nas amostras de esperma fresco e criopreservado, indicando o efeito protetor dos crioprotetores testados. A conclusão obtida foi que o dimetilsulfóxido e 15% de gema de ovo foram o melhor crioprotetor para os espermatozoides do peixe naleh.(AU)


Assuntos
Animais , Cyprinidae/embriologia , Crioprotetores/análise , Análise do Sêmen/veterinária , Dimetil Sulfóxido/análise
9.
Glob Chang Biol ; 26(12): 7255-7267, 2020 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-32896934

RESUMO

The growing use of functional traits in ecological research has brought new insights into biodiversity responses to global environmental change. However, further progress depends on overcoming three major challenges involving (a) statistical correlations between traits, (b) phylogenetic constraints on the combination of traits possessed by any single species, and (c) spatial effects on trait structure and trait-environment relationships. Here, we introduce a new framework for quantifying trait correlations, phylogenetic constraints and spatial variability at large scales by combining openly available species' trait, occurrence and phylogenetic data with gridded, high-resolution environmental layers and computational modelling. Our approach is suitable for use among a wide range of taxonomic groups inhabiting terrestrial, marine and freshwater habitats. We demonstrate its application using freshwater macroinvertebrate data from 35 countries in Europe. We identified a subset of available macroinvertebrate traits, corresponding to a life-history model with axes of resistance, resilience and resource use, as relatively unaffected by correlations and phylogenetic constraints. Trait structure responded more consistently to environmental variation than taxonomic structure, regardless of location. A re-analysis of existing data on macroinvertebrate communities of European alpine streams supported this conclusion, and demonstrated that occurrence-based functional diversity indices are highly sensitive to the traits included in their calculation. Overall, our findings suggest that the search for quantitative trait-environment relationships using single traits or simple combinations of multiple traits is unlikely to be productive. Instead, there is a need to embrace the value of conceptual frameworks linking community responses to environmental change via traits which correspond to the axes of life-history models. Through a novel integration of tools and databases, our flexible framework can address this need.


Assuntos
Biodiversidade , Ecossistema , Ecologia , Europa (Continente) , Fenótipo , Filogenia
10.
Artigo em Inglês | MEDLINE | ID: mdl-31947907

RESUMO

Access to food has been determined to be a factor that strongly influences the dietary intake and eating habit of indigenous people (Orang Asli, OA). This study explored food acquisition and the barriers in obtaining traditional and market foods among the Jahai subtribe (within the Negrito ethnic group) via a qualitative approach. Twenty-eight OA (14 males and 14 females) from Gerik, Perak, Malaysia participated in four focus group discussions (FGDs; two male-only and two female-only groups; seven informants in each FGD). Thematic analysis was adopted to analyse the gathered data. The results found that the Jahai applied both modern (buying and receiving food assistance) and traditional (gathering, farming, fishing, and hunting) methods in obtaining food. The barriers they faced in gathering sufficient food supply included low purchasing power, high demand for food, high transport costs, depletion of food supplies in their surroundings, threats from wild animals on the farm and during food searching activities, and food sharing. Food preparation methods practiced by the OA include roasting and grilling, frying, simmering (gulai), and boiling. In conclusion, this study enhances our understanding of the dietary behaviour of the Jahai subtribe and highlights restricted food access among the OA, which demands urgent attention.


Assuntos
Culinária/estatística & dados numéricos , Abastecimento de Alimentos/estatística & dados numéricos , Povos Indígenas/estatística & dados numéricos , Adolescente , Adulto , Culinária/classificação , Feminino , Humanos , Malásia , Masculino , Pessoa de Meia-Idade , Adulto Jovem
11.
Glob Chang Biol ; 25(2): 602-619, 2019 02.
Artigo em Inglês | MEDLINE | ID: mdl-30414307

RESUMO

Land use and climate change are driving widespread modifications to the biodiverse and functionally unique headwaters of rivers. In temperate and boreal regions, many headwaters drain peatlands where land management and climate change can cause significant soil erosion and peat deposition in rivers. However, effects of peat deposition in river ecosystems remain poorly understood. We provide two lines of evidence-derived from sediment deposition gradients in experimental mesocosms (0-7.5 g/m2 ) and headwaters (0.82-9.67 g/m2 )-for the adverse impact of peat deposition on invertebrate community biodiversity. We found a consistent negative effect of sediment deposition across both the experiment and survey; at the community level, decreases in density (1956 to 56 individuals per m2 in headwaters; mean 823 ± 129 (SE) to 288 ± 115 individuals per m2 in mesocosms) and richness (mean 12 ± 1 to 6 ± 2 taxa in mesocosms) were observed. Sedimentation increased beta diversity amongst experimental replicates and headwaters, reflecting increasing stochasticity amongst tolerant groups in sedimented habitats. With increasing sedimentation, the density of the most common species, Leuctra inermis, declined from 290 ± 60 to 70 ± 30 individuals/m2 on average in mesocosms and >800 individuals/m2 to 0 in the field survey. Traits analysis of mesocosm assemblages suggested biodiversity loss was driven by decreasing abundance of invertebrates with trait combinations sensitive to sedimentation (longer life cycles, active aquatic dispersal of larvae, fixed aquatic eggs, shredding feeding habit). Functional diversity metrics reinforced the idea of more stochastic community assembly under higher sedimentation rates. While mesocosm assemblages showed some compositional differences to surveyed headwaters, ecological responses were consistent across these spatial scales. Our results suggest short-term, small-scale stressor experiments can inform understanding of "real-world" peatland river ecosystems. As climate change and land-use change are expected to enhance peatland erosion, significant alterations to invertebrate biodiversity can be expected where these eroded soils are deposited in rivers.


Assuntos
Biodiversidade , Sedimentos Geológicos/análise , Invertebrados/fisiologia , Rios , Áreas Alagadas , Animais , Mudança Climática , Inglaterra , Movimentos da Água
12.
Sci Total Environ ; 625: 861-871, 2018 Jun 01.
Artigo em Inglês | MEDLINE | ID: mdl-29306829

RESUMO

Trait-based ecology has been developed for decades to infer ecosystem responses to stressors based on the functional structure of communities, yet its value in species-poor systems is largely unknown. Here, we used an extensive dataset in a Spanish region highly prone to non-native fish invasions (15 catchments, N=389 sites) to assess for the first time how species-poor communities respond to large-scale environmental gradients using a taxonomic and functional trait-based approach in riverine fish. We examined total species richness and three functional trait-based indices available when many sites have ≤3 species (specialization, FSpe; originality, FOri and entropy, FEnt). We assessed the responses of these taxonomic and functional indices along gradients of altitude, water pollution, physical habitat degradation and non-native fish biomass. Whilst species richness was relatively sensitive to spatial effects, functional diversity indices were responsive across natural and anthropogenic gradients. All four diversity measures declined with altitude but this decline was modulated by physical habitat degradation (richness, FSpe and FEnt) and the non-native:total fish biomass ratio (FSpe and FOri) in ways that varied between indices. Furthermore, FSpe and FOri were significantly correlated with Total Nitrogen. Non-native fish were a major component of the taxonomic and functional structure of fish communities, raising concerns about potential misdiagnosis between invaded and environmentally-degraded river reaches. Such misdiagnosis was evident in a regional fish index widely used in official monitoring programs. We recommend the application of FSpe and FOri to extensive datasets from monitoring programs in order to generate valuable cross-system information about the impacts of non-native species and habitat degradation, even in species-poor systems. Scoring non-native species apart from habitat degradation in the indices used to determine ecosystem health is essential to develop better management strategies.


Assuntos
Biodiversidade , Conservação dos Recursos Naturais , Ecossistema , Peixes , Água Doce , Animais , Monitoramento Ambiental , Espécies Introduzidas , Rios , Espanha , Análise Espacial
13.
Nat Ecol Evol ; 2(2): 325-333, 2018 02.
Artigo em Inglês | MEDLINE | ID: mdl-29255301

RESUMO

Global change threatens invertebrate biodiversity and its central role in numerous ecosystem functions and services. Functional trait analyses have been advocated to uncover global mechanisms behind biodiversity responses to environmental change, but the application of this approach for invertebrates is underdeveloped relative to other organism groups. From an evaluation of 363 records comprising >1.23 million invertebrates collected from rivers across nine biogeographic regions on three continents, consistent responses of community trait composition and diversity to replicated gradients of reduced glacier cover are demonstrated. After accounting for a systematic regional effect of latitude, the processes shaping river invertebrate functional diversity are globally consistent. Analyses nested within individual regions identified an increase in functional diversity as glacier cover decreases. Community assembly models demonstrated that dispersal limitation was the dominant process underlying these patterns, although environmental filtering was also evident in highly glacierized basins. These findings indicate that predictable mechanisms govern river invertebrate community responses to decreasing glacier cover globally.


Assuntos
Biodiversidade , Aquecimento Global , Camada de Gelo , Invertebrados/fisiologia , Rios , Animais , Ecossistema , Europa (Continente) , Nova Zelândia , América do Norte
14.
Sci Total Environ ; 618: 961-970, 2018 Mar 15.
Artigo em Inglês | MEDLINE | ID: mdl-29126643

RESUMO

Rivers and their floodplains have been severely degraded with increasing global activity and expenditure undertaken on restoration measures to address the degradation. Early restoration schemes focused on habitat creation with mixed ecological success. Part of the lack of ecological success can be attributed to the lack of effective monitoring. The current focus of river restoration practice is the restoration of physical processes and functioning of systems. The ecological assessment of restoration schemes may need to follow the same approach and consider whether schemes restore functional diversity in addition to taxonomic diversity. This paper examines whether two restoration schemes, on lowland UK rivers, restored macroinvertebrate taxonomic and functional (trait) diversity and relates the findings to the Bradshaw's model of ecological restoration. The study schemes are considered a success in terms of restoring physical processes, longitudinal connectivity and the resulting habitat composition. However, the rehabilitation of macroinvertebrate community structure and function was limited and inconsistent, varying over time, depending on the restoration measure applied and the taxonomic or functional index considered. Resampling of species pools at each site revealed a role for functional redundancy, meaning that increases in functional diversity are more difficult to achieve than outcomes based on taxonomic analyses. Our results highlight the usefulness of applying functional traits alongside taxonomic indices in evaluating river restoration projects.


Assuntos
Conservação dos Recursos Naturais , Ecossistema , Recuperação e Remediação Ambiental , Rios , Animais , Biodiversidade , Invertebrados/classificação , Reino Unido
15.
EMBO Rep ; 18(4): 526-535, 2017 04.
Artigo em Inglês | MEDLINE | ID: mdl-28283532

RESUMO

The genome of the highly infectious bacterium Burkholderia pseudomallei harbors an atp operon that encodes an N-type rotary ATPase, in addition to an operon for a regular F-type rotary ATPase. The molecular architecture of N-type ATPases is unknown and their biochemical properties and cellular functions are largely unexplored. We studied the B. pseudomallei N1No-type ATPase and investigated the structure and ion specificity of its membrane-embedded c-ring rotor by single-particle electron cryo-microscopy. Of several amphiphilic compounds tested for solubilizing the complex, the choice of the low-density, low-CMC detergent LDAO was optimal in terms of map quality and resolution. The cryoEM map of the c-ring at 6.1 Å resolution reveals a heptadecameric oligomer with a molecular mass of ~141 kDa. Biochemical measurements indicate that the c17 ring is H+ specific, demonstrating that the ATPase is proton-coupled. The c17 ring stoichiometry results in a very high ion-to-ATP ratio of 5.7. We propose that this N-ATPase is a highly efficient proton pump that helps these melioidosis-causing bacteria to survive in the hostile, acidic environment of phagosomes.


Assuntos
Adenosina Trifosfatases/química , Burkholderia pseudomallei/enzimologia , Modelos Moleculares , Adenosina Trifosfatases/genética , Adenosina Trifosfatases/metabolismo , Adenosina Trifosfatases/ultraestrutura , Substituição de Aminoácidos , Sítios de Ligação , Burkholderia pseudomallei/genética , Ordem dos Genes , Íons/química , Íons/metabolismo , Modelos Biológicos , Óperon , Ligação Proteica , Conformação Proteica , Subunidades Proteicas , Proteínas Recombinantes de Fusão , Espectrometria de Massas por Ionização e Dessorção a Laser Assistida por Matriz , Relação Estrutura-Atividade
16.
Nat Struct Mol Biol ; 24(2): 123-130, 2017 02.
Artigo em Inglês | MEDLINE | ID: mdl-28092368

RESUMO

Polycystin-2 (PC2), a calcium-activated cation TRP channel, is involved in diverse Ca2+ signaling pathways. Malfunctioning Ca2+ regulation in PC2 causes autosomal-dominant polycystic kidney disease. Here we report two cryo-EM structures of distinct channel states of full-length human PC2 in complex with lipids and cations. The structures reveal conformational differences in the selectivity filter and in the large exoplasmic domain (TOP domain), which displays differing N-glycosylation. The more open structure has one cation bound below the selectivity filter (single-ion mode, PC2SI), whereas multiple cations are bound along the translocation pathway in the second structure (multi-ion mode, PC2MI). Ca2+ binding at the entrance of the selectivity filter suggests Ca2+ blockage in PC2MI, and we observed density for the Ca2+-sensing C-terminal EF hand in the unblocked PC2SI state. The states show altered interactions of lipids with the pore loop and TOP domain, thus reflecting the functional diversity of PC2 at different locations, owing to different membrane compositions.


Assuntos
Canais de Cátion TRPP/química , Sítios de Ligação , Cálcio/química , Sinalização do Cálcio , Microscopia Crioeletrônica , Glicosilação , Células HEK293 , Humanos , Modelos Moleculares , Ácidos Fosfatídicos/química , Fosfatidilcolinas/química , Ligação Proteica , Conformação Proteica em alfa-Hélice , Domínios Proteicos , Processamento de Proteína Pós-Traducional , Estrutura Quaternária de Proteína
18.
J Cataract Refract Surg ; 38(1): 117-23, 2012 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-22082750

RESUMO

PURPOSE: To determine predictors of long-term intraocular pressure (IOP) after cataract surgery. SETTING: Hunter Holmes McGuire Veterans Administration Hospital, Richmond, Virginia, USA. DESIGN: Case series. METHODS: Clinical variables, IOP by applanation tonometry, anatomic features on anterior segment optical coherence tomography (AS-OCT), and gonioscopy were assessed before and after uneventful cataract surgery in eyes with open filtration angles. Multivariate linear regression of preoperative measurements was used to predict the mean IOP from 2 to 18 months postoperatively. RESULTS: The study enrolled 77 eyes (77 patients). Prediction of the mean postoperative IOP improved when up to 4 preoperative IOP values were averaged (r(2) = 0.20) compared with using the final preoperative IOP value only (r(2) = 0.13). The mean iris cross-sectional area decreased after surgery, from 3.84 mm(2) to 3.70 mm(2) (P=.01). The mean convex hull of the iris segments also decreased, from 5.05 mm(2) to 4.19 mm(2) (P<.001). The mean postoperative IOP was independently predicted by the preoperative average IOP, primary open-angle glaucoma, and the convex hull of cross-sectional iris segments (P=.001, model r(2) = 0.38) or iris cross-sectional area (P=.003, model r(2) = 0.36). Phacoemulsification parameters, incision type, and anterior chamber angle and depth did not predict postoperative IOP. CONCLUSIONS: Averaging up to 4 preoperative IOP values improved postoperative IOP predictions. A high iris cross-sectional area or convex hull of the iris segments on AS-OCT was associated with lower postoperative IOP. These findings might help identify patients who are likely to have the largest IOP drop after cataract surgery.


Assuntos
Pressão Intraocular/fisiologia , Iris/anatomia & histologia , Implante de Lente Intraocular , Facoemulsificação , Idoso , Anatomia Transversal , Segmento Anterior do Olho/patologia , Anti-Hipertensivos/administração & dosagem , Feminino , Glaucoma de Ângulo Aberto/tratamento farmacológico , Glaucoma de Ângulo Aberto/fisiopatologia , Gonioscopia , Humanos , Masculino , Período Pós-Operatório , Período Pré-Operatório , Estudos Prospectivos , Refração Ocular/fisiologia , Tomografia de Coerência Óptica , Tonometria Ocular , Acuidade Visual/fisiologia
19.
Arch Ophthalmol ; 129(3): 295-300, 2011 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-21402984

RESUMO

OBJECTIVE: To predict postoperative refractive astigmatism in the second eye undergoing cataract surgery using standard biometry and information obtained from the first eye. METHODS: We conducted a retrospective study of 160 patients undergoing bilateral sequential phacoemulsification with capsular bag implantation of a hydrophobic acrylic lens at a Veterans Affairs medical center. Keratometric and refractive astigmatism were described by Jackson cross cylinder with-the-rule (J(0)) and oblique (J(X)) components. Preoperative predictors of postoperative refractive astigmatism in the second eye were determined by multivariable regression. RESULTS: The postoperative refractive astigmatism in the first eye predicted 40% of the variation in the second eye (r(2) = 0.40; P < .001). The multivariable model to predict postoperative with-the-rule astigmatism was J(0PostopEye2) = (0.376 × J(0PostopEye1)) + (0.327 × J(0KeratomEye2)) + (0.097 × J(0PreopEye2)) - 0.099 (P < .001 for first 2 terms; r(2) = 0.56). The multivariable model for oblique astigmatism was J(XPostopEye2) = (0.350 × J(XKeratomEye2)) + (0.231 × J(XKeratomEye1)) + (0.064 × J(XPreopEye2)) - 0.07 (P ≤ .01 for first 2 terms; r(2) = 0.20). CONCLUSIONS: Refractive with-the-rule astigmatism observed postoperatively in the first eye is a strong independent predictor of postoperative with-the-rule astigmatism in the second eye. Keratometric oblique astigmatism in the first eye is a weak but statistically significant independent predictor of postoperative oblique astigmatism in the second eye. Both findings are consistent with mirror symmetry of the corneas about the midsagittal plane and may improve the prediction (and hence control) of postoperative astigmatism in the second eye.


Assuntos
Astigmatismo/diagnóstico , Biometria , Facoemulsificação , Complicações Pós-Operatórias , Refração Ocular/fisiologia , Idoso , Algoritmos , Astigmatismo/etiologia , Feminino , Lateralidade Funcional , Humanos , Implante de Lente Intraocular , Masculino , Estudos Retrospectivos , Medição de Risco
20.
ISRN Ophthalmol ; 2011: 273923, 2011.
Artigo em Inglês | MEDLINE | ID: mdl-24533181

RESUMO

Introduction. Previous cataract surgery studies assumed that first-eye predicted and observed postoperative refractions are equally important for predicting second-eye postoperative refraction. Methods. In a retrospective analysis of 173 patients having bilateral sequential phacoemulsification, multivariable linear regression was used to predict the second-eye postoperative refraction based on refractions predicted by the SRK-T formula for both eyes, the first-eye postoperative refraction, and the difference in IOL selected between eyes. Results. The first-eye observed postoperative refraction was an independent predictor of the second eye postoperative refraction (P < 0.001) and was weighted more heavily than the first-eye predicted refraction. Compared with the SRK-T formula, this model reduced the root-mean-squared (RMS) error of the predicted refraction by 11.3%. Conclusions. The first-eye postoperative refraction is an independent predictor of the second-eye postoperative refraction. The first-eye predicted refraction is less important. These findings may be due to interocular symmetry.

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